# Research Publications for 2011

## Books

**A1.**
Dragović V and Radnović M**:**
*Poncelet Porisms and Beyond: Integrable Billiards, Hyperelliptic Jacobians and Pencils of Quadrics, Frontiers in Mathematics.*
Frontiers in Mathematics,
Springer/Birkhauser,
Basel,
2011,
ISBN 978-3-0348-0015-0,
294 pages.
MR2798784

**A3.**
Ivers DJ (ed.)**:**
*The Earth's Magnetic Interior.*
IAGA Special Sopron Book Series,
Eduard Petrovsky, Emilio Herrera-Bervera, T Harinarayana, David Ivers (ed.),
Springer,
The Netherlands,
2011,
ISBN 978-94-007-0322-3,
445 pages.

**A4.**
Easdown D**:**
*A First Course in Linear Algebra 3rd Edition.*
Pearson Australia,
Frenchs Forest New South Wales,
2011,
ISBN 978 1442 548251,
353 pages.

## Chapters in Books

**B1.**
Bielecki TR, Crepey S, Jeanblanc M and Rutkowski M**:**
Convertible bonds in a defaultable diffusion model,
*Stochastic Analysis with Financial Applications (Hong Kong 2009).*
Progress in Probability (Vol. 65),
Springer Basel,
Switzerland,
2011,
ISBN 978-3-0348-0097-6,
255–298.

**B1.**
Boyden JA, Müller RD, Gurnis M, Torsvik TH, Clark JA, Turner M, Ivey-Law H, Watson RJ and Cannon JJ**:**
Next-generation plate-tectonic reconstructions using GPlates,
*Geoinformatics: Cyberinfrastructure for the Solid Earth Sciences.*
Earth sciences; Geographical information systems (GIS) & remote sensing,
Cambridge University Press,
USA,
2011,
ISBN 978-0-521-89715-0,
388.

**B1.**
Farb B, Hruska GC and Thomas A**:**
Problems on automorphism groups of nonpositively curved polyhedral complexes and their lattices,
*Geometry, rigidity, and group actions.*
University of Chicago Press,
Chicago IL,
2011,
ISBN 978-0-226-23788-6; 0-226-23788-5,
xii+646.
MR2797111

**B1.**
Guillarmou C and Tzou L**:**
Survey on Calderon inverse problem in dimension 2,
*Inside Out II.*
MSRI Publications,
MSRI,
2011,
ISBN 13: 978-1-107-03201-9,
119–166.

**B1.**
Hu J and Xiao Z**:**
Partially Harmonic Tensors and Quantized Schur-Weyl Duality,
*Quantized Algebra and Physics.*
Nankai Series in Pure, Applied Mathematics and Theoretical Physics,
World Scientific,
Singapore,
2011,
ISBN 978-981-4340-44-1,
109–137.

**B1.**
Rosner B, Peiris MS, Chan JSK and Marchev D**:**
Descriptive Statistics,
*MATH 1015: Biostatistics.*
CENGAGE Learning,
Australia,
2011,
ISBN 978-0170213349,
272.

**B1.**
Rutkowski M**:**
Options on Credit default swaps and credit default indexes,
*Credit Risk Frontiers: Subprime Crisis, Pricing and Hedging, CVA, MBS, Ratings, and Liquidity.*
Financial Series,
John Wiley and Sons,
New Jersey, USA,
2011,
ISBN 978-1-576=60358-1,
219–282.

**B1.**
Seneta E**:**
Probability Paradoxes,
*A Bouquet for the Gardner. Martin Gardner Remembered.*
The Lewis Carroll Society of North America,
(See www.LewisCarroll.org),
2011,
ISBN 978-0-930326-17-3,
175–183.

## Journal Articles

**C1.**
Abdulla NA, Mohamed I, Peiris MS and Azizan NA**:**
A New Iterative Procedure for Estimation of RCA Parameters based on Estimating Functions.
*Applied Mathematical Sciences*,
Vol. 5
(2011),
no.No 4,
193 – 202,.

**C1.**
Abel RJR, Chan NHN, Combe D and Palmer WD**:**
Existence of GBRDs with block size 4 and BRDs with block size 5.
*Designs, Codes and Cryptography*,
61
(2011),
no.3,
285–300.

**C1.**
Abel RJR, Combe D, Nelson AM and Palmer WD**:**
GBRDs with block size three over 2-groups semi-dihedral groups and nilpotent groups.
*The Electronic Journal of Combinatorics*,
18
(2011),
no.1,
1–12.

**C1.**
Achar PN and Henderson A**:**
Corrigendum to "Orbit closures in the enhanced nilpotent cone" [Adv. Math. 219 (1) (2008) 27–62].
*Advances in Mathematics*,
228
(2011),
no.1,
2984–2988.
MR2838068

**C1.**
Achar PN, Henderson A and Jones BF**:**
Normality of orbit closures in the enhanced nilpotent cone.
*Nagoya Mathematics Journal*,
203
(2011),
1–45.

**C1.**
Achar PN, Henderson A and Sommers E**:**
Pieces of nilpotent cones for classical groups.
*Representation Theory*,
15
(2011),
584–616.

**C1.**
Atkinson J**:**
Singularities of Type-Q ABS Equations.
*Symmetry, Integrability and Geometry: Methods and Applications*,
Paper 073
(2011),
14 pp.

**C1.**
Barnes DW**:**
Some theorems on Leibniz algebras.
*Communications in Algebra*,
39
(2011),
no.7,
2463–2472.

**C1.**
Barnes PJ, Yonekura Y, Fukui Y, Miller AT, Mühlegger M, Agars LC, Miyamoto Y, Furukawa N, Papadopoulos G, Jones SL, Hernandez AK, O'Dougherty SN and Tan JC**:**
The galactic Census of High- and Medium-Mass Protostars. I. Catalogs and first results from Mopra HCO+ maps.
*Astrophysical Journal, Supplement Series*,
196
(2011),
no.1,
38 pp.

**C1.**
Bennett MR, Farnell L and Gibson WG**:**
A Model of NMDA Receptor Control of F-actin Treadmilling in Synaptic Spines and Their Growth.
*Bulletin of Mathematical Biology*,
73
(2011),
2109–2131.

**C1.**
Bertram CD, Macaskill C and Moore JE jr**:**
Simulation of a chain of collapsible contracting lymphangions with progressive valve closure.
*ASME Journal of Biomechanical Engineering*,
133
(2011),
011008 (10 pages).

**C1.**
Bielecki TR, Jeanblanc M and Rutkowski M**:**
Hedging of a credit default swaption in the CIR default intensity model.
*Finance and Stochastics*,
15
(2011),
541–572.

**C1.**
Cao X, Wang B and Zhang Z**:**
On locally conformatlly flat gradient shrinking Ricci solitons.
*Communications in Contemporary Mathematics (CCM)*,
13
(2011),
no.2,
269–282.

**C1.**
Cave GE and Fraser WB**:**
The effect of yarn elasticity on the stability of the two-for-one twister balloon.
*Journal of the Textile Institute*,
2011
(2011),
no.iFirst Article,
1–16.

**C1.**
Chan JSK and Wan WY**:**
Bayesian approach to analysing longitudinal bivariate binary data with informative dropout.
*Computational Statistics*,
26
(2011),
no.1,
121.

**C1.**
Chavanasporn W and Ewald CO**:**
Privatization of businesses and flexible investment: a real option approach.
*Decisions in Economics and Finance*,
Online
(2011),
Online.

**C1.**
Chavanasporn W and Ewald CO**:**
A numerical method for solving stochastic optimal control problems with linear control.
*Computational Economics*,
Online
(2011),
Online.

**C1.**
Chen CWS, Chan JSK, Gerlach R and Hsieh WYL**:**
A comparison of estimators for regression models with change points.
*Statistics and Computing*,
21
(2011),
no.3,
395–414.

**C1.**
Chen CWS, Chan JSK, So MKP and Lee KKM**:**
Classification in segmented regression p.
*Computational Statistics and Data Analysis*,
55
(2011),
no.7,
2276–2287.

**C1.**
Chen XX, Tian G and Zhang Z**:**
On the Weak Kähler-Ricci Flow.
*Transactions of the American Mathematical Society*,
363
(2011),
no.6,
2849–2863.

**C1.**
Collinson EJ, Wimmer-Kleikamp S, Gerega SK, Yang YH, Parish CR, Dawes IW and Stocker R**:**
The yeast homolog of heme oxygenase-1 affords cellular antioxidant protection via the transcriptional regulation of known antioxidant genes.
*The Journal of Biological Chemistry*,
286
(2011),
no.3,
2205–2214.

**C1.**
Creutz B**:**
Potential Sha for abelian varieties.
*Journal of Number Theory*,
131
(2011),
2162–2174.

**C1.**
Crooks ECM and Dancer EN**:**
Competition systems with strong interaction on a subdomain.
*Topological Methods in Nonlinear Analysis*,
37
(2011),
37–53.

**C1.**
Dancer EN**:**
On the least point of the spectrum of certain cooperative linear systems with a large parameter.
*Journal of Differential Equations*,
250
(2011),
33–38.

**C1.**
Dancer EN, Du Y and Guo Z**:**
Finite Morse index solutions of an elliptic equation with supercritical exponent.
*Journal of Differential Equations*,
250
(2011),
no.8,
3281–3310.

**C1.**
Dancer EN, Santra S and Wei J**:**
Least energy nodal solution of a singular perturbed problem with jumping nonlinearity.
*Ann. Scuola Norm. Sup. Pisa Cl. Sci.*,
10
(2011),
19–36.

**C1.**
Dancer EN, Santra S and Wei J**:**
Asymptotic behavior of the least energy solution of a problem with competing powers.
*Journal of Functional Analysis*,
261
(2011),
no.8,
2094–2134.

**C1.**
Dancer EN, Wang K and Zhang Z**:**
Uniform Hölder estimate for singularly perturbed parabolic systems of Bose-Einstein condensates and competing species.
*Journal of Differential Equations*,
251
(2011),
2737–2769.

**C1.**
Daners D**:**
Krahn's proof of the Rayleigh conjecture revisited.
*Archiv der Mathematik (Basel)*,
96
(2011),
no.2,
187–199.

**C1.**
Davydov A and Molev AI**:**
A categorical approach to classical and quantum Schur-Weyl duality.
*Contemporary Mathematics*,
537
(2011),
143–171.

**C1.**
Diwold K, Schaerf TM, Myerscough MR, Middendorf M and Beekman M**:**
Deciding on the wing: in-flight decision making and search space sampling in the red dwarf honeybee Apis florea.
*Swarm Intell*,
5
(2011),
121–141.

**C1.**
Duistermaat JJ and Joshi N**:**
Okamoto's Space for the First Painlevé Equation in Boutroux Coordinates.
*Archive for Rational Mechanics and Analysis*,
202
(2011),
no.3,
707–785.

**C1.**
Dyer MJ and Lehrer GI**:**
Reflection subgroups of finite and affine Weyl groups.
*Transactions of the American Mathematical Society*,
363
(2011),
no.11,
5971–6005.

**C1.**
Dyer MJ and Lehrer GI**:**
Root subsystems of loop extensions.
*Transformation Groups*,
16
(2011),
no.3,
767–781.

**C1.**
East J and McNamara PJ**:**
On the work performed by a transformation semigroup.
*Australasian Journal of Combinatorics*,
49
(2011),
95–109.

**C1.**
Edwards JR and Myerscough MR**:**
Intelligent decisions from the hive mind: Foragers and nectar receivers of Apis mellifera collaborate to optimise active forager numbers.
*Journal of Theoretical Biology*,
271
(2011),
no.1,
64–77.

**C1.**
Ewald CO and Wang WK**:**
Analytic solutions for infinite horizon stochastic optimal control problems via finite horizon approximation: A practical guide.
*Mathematical Social Sciences*,
61
(2011),
no.3,
146–151.

**C1.**
Ewald CO and Xiao Y**:**
Information: Price and impact on general welfare and optimal investment. An anticipative stochastic differential game model.
*Advances in Applied Probability*,
43
(2011),
no.1,
97–120.

**C1.**
Faes C, Ormerod JT and Wand MP**:**
Variational Bayesian Inference for Parametric and Nonparametric Regression With Missing Data.
*Journal of the American Statistical Association*,
106
(2011),
no.495,
959–971.

**C1.**
Farmer D and Ivers DJ**:**
Aspects of a hybrid hp-finite element/spectral method for the linearised magnetohydrodynamic equations in spherical geometries.
*ANZIAM Journal*,
52
(2011),
C379–C394.

**C1.**
Federico S, Goldys B and Gozzi F**:**
HJB equations for the optimal control of differential equations with delays and state constraints, II: Verification and optimal feedbacks.
*SIAM J. Control Optim*,
49
(2011),
no.6,
2378–2414.
MR2854622

**C1.**
Feher K, Whelan J and Müller S**:**
Assessing Modularity Using a Random Matrix Theory Approach.
*Statistical Applications in Genetics and Molecular Biology*,
10
(2011),
no.1,
Article 44, 36 pages.

**C1.**
Finlay R, Fung T and Seneta E**:**
Autocorrelation Functions.
*International Statistical Review*,
79
(2011),
no.2,
255–271.

**C1.**
Firmin L, Müller S and Rösler K**:**
A method to measure the distribution of latencies of motor evoked potentials in man (with online suplement).
*Clinical Neurophysiology*,
122
(2011),
176–182.

**C1.**
Fisher NI and Lee AJ**:**
Getting the 'correct' answer from survey responses: A simple application of the EM algorithm.
*Australian and New Zealand Journal of Statistics*,
53
(2011),
no.3,
353–364.

**C1.**
Fisher NI, Lee AJ, Cribb JHJ and Haynes GD**:**
Public perceptions of foxes and fox eradication in Tasmania.
*Australian Zoologist*,
35
(2011),
no.3,
576–589.

**C1.**
Frank J and Gottwald GA**:**
The Langevin Limit of the Nosé-Hoover-Langevin Thermostat.
*J Stat Phys*,
143
(2011),
715–724.

**C1.**
Fung T**:**
Rate of Decay of the Tail Dependence Coefficient for the Skew t Distribution.
*Sri Lankan Journal of Applied Statistics*,
12
(2011),
no.Special Issue: International Statistics Conference 2011,
27–40.

**C1.**
Fung T and Seneta E**:**
Tail dependence and skew distributions.
*Quantitative Finance*,
11
(2011),
no.3,
327–333.

**C1.**
Fung T and Seneta E**:**
The bivariate normal copula function is regularly varying.
*Statistics and Probability Letters*,
81
(2011),
1670–1676.

**C1.**
Gao J, Wang Q and Yin J**:**
Specification testing in nonlinear time series with long-range dependence.
*Econometric Theory*,
27
(2011),
no.2,
260–284.

**C1.**
Gottwald GA, Mitchell L and Reich S**:**
Controlling overestimation of error covariance in ensemble Kalman filters with sparse observations: A variance limiting Kalman filter.
*Monthly Weather Review*,
139
(2011),
2650–2667.

**C1.**
Gubbins D, Ivers DJ, Masterton M and Winch DE**:**
Analysis of lithospheric magnetization in vector spherical harmonics.
*Geophysical Journal International*,
187
(2011),
99–117.

**C1.**
Guillarmou C, Salo M and Tzou L**:**
Inverse scattering at fixed energy for surfaces with Euclidean ends.
*Communications in Mathematical Physics*,
303
(2011),
761–784.

**C1.**
Guillarmou C and Tzou L**:**
Calderon inverse problem with partial data on Riemann surfaces.
*Duke Mathematical Journal*,
158
(2011),
83–120.

**C1.**
Guillarmou C and Tzou L**:**
Identification of a connection from Cauchy data space on a Riemann surface with boundary.
*Geometric and Functional Analysis*,
21
(2011),
393–418.

**C1.**
Gupta N, Bandeira N, Keich U and Pevzner PA**:**
Target-Decoy Approach and False Discovery Rate: When Things May Go Wrong.
*Journal of the American Society for Mass Spectrometry*,
22
(2011),
1111–1120.

**C1.**
Hall P, Ormerod JT and Wand MP**:**
Theory of Gaussian Variational Approximation for a Poisson Mixed Model.
*Statistica Sinica*,
21
(2011),
369–389.

**C1.**
Harvey E, Kirk V, Wechselberger M and Sneyd J**:**
Multiple Timescales, Mixed Mode Oscillations and Canards in Models of Intracellular Calcium Dynamics.
*Journal of Nonlinear Science*,
21
(2011),
639–683.

**C1.**
Hawkes K, Kim PS, Kennedy B, Bohlender R and Hawks J**:**
A reappraisal of grandmothering and natural selection.
*Proceedings of the Royal Society B*,
278
(2011),
1936–1938.

**C1.**
Hegedüs G and Kasprzyk AM**:**
Roots of Ehrhart Polynomials of Smooth Fano Polytopes.
*Discrete and Computational Geometry*,
46
(2011),
488–499.

**C1.**
Hillman JA**:**
the linking pairings of orientable Seifert manifolds.
*Topology and its Applications*,
158
(2011),
468–478.

**C1.**
Hillman JA**:**
Alexander polynomials of ribbon links.
*Journal of Knot Theory and its Ramifications*,
20
(2011),
327–331.

**C1.**
Hillman JA**:**
2-Knots with solvable groups.
*Journal of Knot Theory and its Ramifications*,
20
(2011),
no.7,
977–994.

**C1.**
Hillman JA**:**
Geometric decompositions of 4-dimensional orbifold bundles.
*Journal of the Mathematical Society of Japan*,
63
(2011),
871–886.

**C1.**
Hillman JA and Roushon SK**:**
Surgery on \(\widetilde{\mathbb{SL}}\times\mathbb{E}^n\)-manifolds.
*Canadian Mathematical Bulletin*,
54
(2011),
283–287.

**C1.**
Hodgson C, Rubinstein JH, Segerman H and Tillmann S**:**
Veering triangulations admit strict angle structures.
*Geometry and Topology*,
15
(2011),
2073–2089.

**C1.**
Hu J**:**
BMW algebra, quantized coordinate algebra and type \(C\) Schur-Weyl duality.
*Representation Theory*,
15
(2011),
1–62.

**C1.**
Hu J**:**
On a generalisation of the Dipper-James-Murphy conjecture.
*Journal of Combinatorial Theory, Series A*,
118
(2011),
78–93.

**C1.**
Imai J and Kawai R**:**
On finite truncation of infinite shot noise series representation of tempered stable laws.
*Physica A: Statistical Mechanics and its Applications*,
390
(2011),
no.23-24,
4411–4425.

**C1.**
Isaev AP, Molev AI and Ogievetsky OV**:**
A new fusion procedure for the Brauer algebra and evaluation homomorphisms.
*International Mathematics Research Notices*,
2011
(2011),
online, 36 pages.

**C1.**
Ivers DJ and Phillips CG**:**
Anisotropic turbulent thermal diffusion and thermal convection in a rapidly rotating fluid sphere.
*Physics of the Earth and Planetary Interiors*,
190-191
(2011),
1–9.

**C1.**
Jaco W, Rubinstein JH and Tillmann S**:**
Coverings and Minimal Triangulations of 3-Manifolds.
*Algebraic and Geometric Topology*,
11
(2011),
1257–1265.

**C1.**
Jayaswal V, Ababneh F, Jermiin LS and Robinson J**:**
Reducing model complexity of the general markov model of evolution.
*Molecular Biology and Evolution*,
28
(2011),
no.11,
3045–3059.

**C1.**
Jayaswal V, Jermiin LS, Poladian L and Robinson J**:**
Two Stationary Nonhomogeneous Markov Models of Nucleotide Sequence Evolution.
*Systematic Biology*,
60
(2011),
no.1,
74–86.

**C1.**
Jayaswal V, Lutherborrow M, Ma DD and Yang YH**:**
Identification of microRNA-mRNA Modules using Microarray Data.
*BMC Genomics*,
12
(2011),
138.

**C1.**
Joshi N and Shi Y**:**
Exact solutions of a q-discrete second Painlevé equation from its iso-monodromy deformation problem: I. Rational solutions.
*Proceedings of the Royal Society A*,
467
(2011),
3443–3468.

**C1.**
Kao SC, Griggs K, Lee K, Armstrong NJ, Clarke S, Vardy J, Zandwijk N, Burn J, Caughan BCM, Henderson DW and Klebe S**:**
Validation of the use of a minimal panel of antibodies for the diagnosis of malignant pleural mesothelioma.
*Pathology*,
43
(2011),
no.4,
313–317.

**C1.**
Kao SC, Klebe S, Henderson DW, Reid G, Chatfield M, Armstrong NJ, Yan T, Vardy J, Clarke S, Zandwijk N and Caughan BM**:**
Low Calretinin expression and high Neutrophil-to-Lymphocyte Ratio are poor prognostic factors in malignant mesothelioma patients undergoing extrapleural pneumonectomy.
*Journal of Thoracic Oncology*,
6
(2011),
no.11,
1923–1929.

**C1.**
Kao SC, Lee K, Armstrong NJ, Clarke S, Vardy J, Zandwijk N, Reid G, Burn J, Caughan BCM, Henderson DW and Klebe S**:**
Validation of tissue microarray technology in malignant pleural mesothelioma.
*Pathology*,
43
(2011),
no.2,
128–132.

**C1.**
Kashima K and Kawai R**:**
A weak approximation of stochastic differential equations with jumps through tempered polynomial optimization.
*Stochastic Models*,
27
(2011),
no.1,
26–49.

**C1.**
Kashima K and Kawai R**:**
An optimization approach to weak approximation of stochastic differential equations with jumps.
*Applied Numerical Mathematics*,
61
(2011),
no.5,
641–650.

**C1.**
Kawai R and Masuda H**:**
On simulation of tempered stable random variates.
*Journal of Computational and Applied Mathematics*,
235
(2011),
no.8,
2873–2887.

**C1.**
Kawai R and Masuda H**:**
On the local asymptotic behavior of the likelihood function for Meixner Lévy processes under high-frequency sampling.
*Statistics and Probability Letters*,
81
(2011),
no.4,
460–469.

**C1.**
Kawai R and Masuda H**:**
Exact discrete sampling of finite variation tempered stable Ornstein-Uhlenbeck processes.
*Monte Carlo Methods and Applications*,
17
(2011),
no.3,
279–300.

**C1.**
Kawai R and Takeuchi A**:**
Greeks formulas for an asset price model with gamma processes.
*Mathematical Finance*,
21
(2011),
no.4,
723–742.

**C1.**
Kelly D and Gottwald GA**:**
On the topology of synchrony optimized networks of a Kuramoto-model with non-identical oscillators.
*Chaos*,
21
(2011),
025110.

**C1.**
Khoury DS, Myerscough MR and Barron AB**:**
A Quantitative Model of Honey Bee Colony Population Dynamics.
*PLoS ONE*,
6
(2011),
no.e18491,
1–6.

**C1.**
Kim PS and Lee PP**:**
T cell state transitions produce an emergent change detector.
*Journal of Theoretical Biology*,
275
(2011),
no.1,
59–69.

**C1.**
Kim PS, Lee PP and Levy D**:**
A theory of immunodominance and adaptive regulation.
*Bulletin of Mathematical Biology*,
73
(2011),
no.7,
1645–1665.

**C1.**
Kirschner MB, Kao SC, Edelman JJ, Armstrong NJ, Vallely MP, Zandwijk N and Reid G**:**
Haemolysis during sample preparation alters microRNA content of plasma.
*PLoS ONE*,
6
(2011),
no.9,
e24145.

**C1.**
Kolassa J and Robinson J**:**
Saddlepoint approximations for likelihood ratio like statistics with applications to permutation tests.
*Annals of Statistics*,
39
(2011),
no.6,
3357–3368.

**C1.**
Laca M, Raeburn I and Ramagge J**:**
Phase transition on Exel crossed products associated to dilation matrices.
*Journal of Functional Analysis*,
261
(2011),
3633–3664.

**C1.**
Lai TL, Shao QM and Wang Q**:**
Cramér type moderate deviations for Studentized U-statistics.
*ESAIM - Probability and Statistics*,
15
(2011),
168–179.

**C1.**
Lam N and Zhang RB**:**
u-Cohomology formula for unitarizable modules over general linear superalgebras.
*Journal of Algebra*,
327
(2011),
50–70.

**C1.**
Lehrer GI, Nakano DK and Zhang RB**:**
Detecting cohomology for Lie superalgebras.
*Advances in Mathematics*,
228
(2011),
no.4,
2098–2115.

**C1.**
Lehrer GI, Zhang RB and Zhang H**:**
A quantum analogue of the first fundamental theorem of classical invariant theory.
*Communications in Mathematical Physics*,
301
(2011),
131–174.

**C1.**
Li L and Rutkowski M**:**
Market Models of Forward CDS Spreads.
*Progress in Probability*,
65
(2011),
361–411.

**C1.**
Liachko I, Tanaka E, Cox K, Claire SC, Yang L, Seher A, Hallas L, Cha E, Kang G, Pace H, Barrow J, Inada M, Tye BK and Keich U**:**
Novel features of ARS selection in budding yeast Lachancea kluyveri.
*BMC Genomics*,
12
(2011),
Art. 633.

**C1.**
Loi TH, Campain AE, Bryant A, Molloy TJ, Lutherborrow M, Turner J, Yang YH and Ma DDF**:**
Discriminating lymphomas and reactive lymphadenopathy in lymph node biopsies by gene expression profiling.
*BMC Medical Genomics*,
4
(2011),
no.27,
10.

**C1.**
Lott J and Zhang Z**:**
Ricci flow on quasi-projective manifolds.
*Duke Mathematical Journal*,
156
(2011),
no.1,
87–123.

**C1.**
Lutherborrow M, Bryant A, Jayaswal V, Agapiou D, Palma CA, Yang YH and Ma DD**:**
Expression profiling of cytogenetically normal acute myeloid leukemia identifies microRNAs that target genes involved in monocytic differentiation.
*American Journal of Hematology*,
86
(2011),
no.1,
2–11.

**C1.**
Müller S and Chhay H**:**
Partially smooth tail-index estimation for small samples.
*Computational Statistics*,
26
(2011),
491–505.

**C1.**
Ma C and Robinson J**:**
Lot acceptance and compliance testing based on the sample mean and minimum/maximum.
*Journal of Statistical Planning and Inference*,
141
(2011),
2440–2448.

**C1.**
Marques FZ, Campain AE, Davern PJ, Yang YH, Head GA and Morris BJ**:**
Genes Influencing Circadian Differences in Blood Pressure in Hypertensive Mice.
*PLoS ONE*,
6
(2011),
no.4,
9 pages.

**C1.**
Marques FZ, Campain AE, Davern PJ, Yang YH, Head GA and Morris BJ**:**
Global identification of the genes and pathways differentially expressed in hypothalamus in early and established neurogenic hypertension.
*Physiological Genomics*,
43
(2011),
766–771.

**C1.**
Marques FZ, Campain AE, Tomaszewski M, Zukowska-Szczechowska E, Yang YH, Charchar FJ and Morris BJ**:**
Gene expression profiling reveals renin mRNA overexpression in human hypertensive kidneys and a role for microRNAs.
*Hypertension*,
58
(2011),
1093–1098.

**C1.**
Martinez JG, Carroll RJ, Müller S, Sampson JN and Chatterjee N**:**
Empirical Performance of Cross-Validation with Oracle Methods in a Genomics Context.
*The American Statistician*,
65
(2011),
no.4,
223–228.

**C1.**
Mazenc F, Kim PS and Niculescu SI**:**
Stability of an imatinib and immune model with delays.
*IMA Journal of Mathematical Control and Information*,
28
(2011),
447−462.

**C1.**
Meng G and Zhang RB**:**
Generalized MICZ-Kepler problems and unitary highest weight modules.
*Journal of Mathematical Physics*,
52
(2011),
no.4,
042106 (23 pages).

**C1.**
Midgly DJ, McGee PA, Stewart M and Saliba JA**:**
Diverse assemblages of ascomycetus fungi occur in woodland, grassland and cropping-soils of northern-central New South Wales, Australia.
*Australasian Mycologist*,
29
(2011),
29–36.

**C1.**
Molev AI**:**
Combinatorial bases for covariant representations of the Lie superalgebra gl(m|n).
*Bulletin of the Institute of Mathematics, Academia Sinica.*,
6
(2011),
no.4,
415–462.

**C1.**
Ng P and Keich U**:**
Alignment constrained sampling.
*Journal of computational biology*,
18
(2011),
no.2,
155–168.

**C1.**
O'Sullivan P**:**
Algebraic cycles on an abelian variety.
*Journal für die Reine und Angewandte Mathematik*,
654
(2011),
1–81.

**C1.**
Olver S**:**
Computation of equilibrium measures.
*Journal of Approximation Theory*,
163
(2011),
1185–1207.

**C1.**
Olver S**:**
Numerical solution of Riemann-Hilbert problems: Painlevé II.
*Foundations of Computational Mathematics*,
11
(2011),
153–179.

**C1.**
Olver S**:**
Computing the Hilbert transform and its inverse.
*Mathematics of Computation*,
80
(2011),
1745–1767.

**C1.**
Ormerod JT**:**
Grid Based Variational Approximations.
*Computational Statistics and Data Analysis*,
55
(2011),
45–56.

**C1.**
Paquin D, Kim PS, Lee PP and Levy D**:**
Strategic treatment interruptions during imatinib treatment of chronic myelogenous leukemia.
*Bulletin of Mathematical Biology*,
73
(2011),
no.5,
1082–1100.

**C1.**
Peiris MS, Thavaneswaran A and Appadoo S**:**
Doubly stochastic models with GARCH innovations.
*Applied Mathematics Letters*,
24
(2011),
no.11,
1768–1773.

**C1.**
Peters T, Bulger DW, Loi TH, Yang YH and Ma C**:**
Two-step cross -entropy feature selection for microarrays - power through complementarity.
*IEEE/ACM Transactions on computational biology and bioinformatics*,
8
(2011),
no.4,
1148–1151.

**C1.**
Poladian L, Straton M, Docherty A and Argyros A**:**
Pure chiral optical fibres.
*Optics Express*,
19
(2011),
no.2,
968–980.

**C1.**
Roozemond DA**:**
On Lie algebras generated by few extremal elements.
*Journal of Algebra*,
348
(2011),
462–476.

**C1.**
Sa Ngiamsunthorn P**:**
Persistence of bounded solutions of parabolic equations under domain perturbation.
*Journal of Evolution Equations*,
Online
(2011),
no.August,
26 pages.

**C1.**
Santra S and Wei J**:**
Asymptotic behavior of solutions of a biharmonic Dirichlet problem with large exponents.
*Journal d'Analyse Mathématique*,
115
(2011),
no.1,
1–31.

**C1.**
Schaerf TM, Myerscough MR, Makinson JC and Beekman M**:**
Inaccurate and unverified information in decision making: A model for the nest site selection process of Apis florea.
*Animal Behaviour*,
82
(2011),
995–1013.

**C1.**
Schröder-Turk GE, Wickham S, Averdunk H, Brink F, Fitz Gerald JD, Poladian L, Large MCJ and Hyde ST**:**
The chiral structure of porous chitin within the wing-scales of Callophrys rubi.
*Journal of Structural Biology*,
174
(2011),
290–295.

**C1.**
Seneta E**:**
Victorian probability and Lewis Carroll.
*Journal of the Royal Statistical Society*,
Online
(2011),
no.August,
17 pages.

**C1.**
Shitan M and Peiris MS**:**
Time Series Properties of the Class of Generalized First-Order Autoregressive Processes with Moving Average Errors.
*Communications in Statistics - Theory and Methods*,
40
(2011),
no.13,
2259–2275.

**C1.**
Shneerson LM and Easdown D**:**
Growth of finitely presented Rees quotients of free inverse semigroups.
*International Journal of Algebra and Computation*,
21
(2011),
315–328.

**C1.**
Sparks RS, Sutton G, Toscas P and Ormerod JT**:**
Modelling Inverse Gaussian Data with Censored Response Values: EM versus MCMC.
*Advances in Decision Sciences*,
2011
(2011),
no.Article ID 571768,
8 pages.

**C1.**
Stark AE and Seneta E**:**
A N Kolmogorov's defence of Mendelism.
*Genetics and Molecular Biology*,
34
(2011),
no.2,
177–186.

**C1.**
Suppiah V, Gaudieri S, Armstrong NJ, Connor KSO, Berg T, Weltman M, Abate ML, Spengler U, Bassendine M, Dore GJ, Irving WL, Powell E, Hellard M, Riordan S, Mathews G, Sheridan D, Nattermann J, Smedile A, Müller T, Hammond E, Dunn D, Negro F, Bochud PY, Mallal S, Ahlenstiel G, Stewart GJ, George J and Booth DR**:**
IL28B, HLA-C and KIR variants additively and interactively predict response to therapy in chronic hepatitis C virus infection.
*PLoS Medicine*,
8
(2011),
no.9,
e1001092.

**C1.**
Tanaka E, Bailey TL, Grant CE, Noble WS and Keich U**:**
Improved similarity scors for comparing motifs.
*Bioinformatics*,
27
(2011),
no.12,
1603–1609.

**C1.**
Teka W, Tabak J, Vo T, Wechselberger M and Bertram R**:**
The dynamics underlying pseudo-plateau bursting in a pituitary cell model.
*Journal of Mathematical Neuroscience*,
1
(2011),
no.12,
23.

**C1.**
Thomas A and Wortman K**:**
Infinite generation of non-cocompact lattices on right-angled buildings.
*Algebraic and Geometric Topology*,
11
(2011),
no.2,
929–938.

**C1.**
Tuft KD, Crowther MS, Connell K, Müller S and McArthur C**:**
Predation risk and competitive interactions affect foraging of an endangered refuge-dependent herbivore.
*Animal Conservation*,
14
(2011),
447–457.

**C1.**
Wan WY and Chan JSK**:**
Bayesian analysis of robust Poisson geometric process model using heavy-tailed distributions.
*Computational Statistics and Data Analysis*,
55
(2011),
687–702.

**C1.**
Wang JJJ, Chan JSK and Choy STB**:**
Stochastic Volatility Models with Leverage and Heavy-tailed Distributions: A Bayesian Approach using Scale Mixtures.
*Computational Statistics and Data Analysis*,
55
(2011),
852–862.

**C1.**
Wang JJJ, Choy STB and Chan JSK**:**
Modelling stochastic volatility using generalized t distribution.
*Journal of Statistical Computation and Simulation*,
iFirst
(2011),
no.2011,
1–15.

**C1.**
Wang Q**:**
Refined Self-normalized Large Deviations for Independent Random Variables.
*Journal of Theoretical Probability*,
24
(2011),
no.2,
307–329.

**C1.**
Wang Q and Phillips PCB**:**
Asymptotic theory for zero energy functionals with nonparametric regression applications.
*Econometric Theory*,
27
(2011),
no.2,
235–259.

**C1.**
Watkins M**:**
Computing with Hecke Grossencharacters.
*Publications Mathematiques de Besancon*,
2011
(2011),
119–135.

**C1.**
Weiss V and Cowan R**:**
Topological Relationships in Spatial Tessellations.
*Advances in Applied Probability*,
43
(2011),
963–984.

**C1.**
Wishart JR**:**
Minimax lower bound for kink location estimators in a nonparametric regression model with long-range dependence.
*Statistics and Probability Letters*,
81
(2011),
no.12,
1871–1875.

**C1.**
Wood LN, Vu T, Bower M, Brown N, Skalicky J, Donovan D, Loch B, Joshi N and Bloom W**:**
Professional development for teaching in higher education.
*International Journal of Mathematical Education in Science and Technology*,
42
(2011),
no.7,
997–1009.

**C1.**
Wu JQ, Dwyer DE, Dyer WB, Yang YH, Wang B and Saksena NK**:**
Genome-wide analysis of primary CD4+ and CD8+ T cell transcriptomes shows evidence for a network of enriched pathways associated with HIV disease.
*Retrovirology*,
8
(2011),
no.18,
1–21.

**C1.**
Xenitidis P, Nijhoff FW and Lobb SB**:**
On the Lagrangian formulation of multidimensionally consistent systems.
*Proceedings of the Royal Society of London*,
467
(2011),
no.2135,
3295–3317.

**C1.**
Yang P, Ho JWK, Yang YH and Zhou BB**:**
Gene-gene interaction filtering with ensemble of filters.
*BMC Bioinformatics*,
12, Supp 1
(2011),
no.S10,
10 pages.

**C1.**
Yang Z, Ewald CO and Menkens O**:**
Pricing and hedging of Asian options: quasi-explicit solutions via Malliavin calculus.
*Mathematical Methods of Operations Research*,
Online
(2011),
Online.

**C1.**
Yang Z, Ewald CO and Wang WK**:**
A comparative analysis of the value of information in a continuous time market model with partial information: the cases of Log-Utility and CRRA.
*Journal of Probability and Statistics*,
2011
(2011),
no.Article ID 238623,
23 pages.
MR2678806

**C1.**
Yoo-Kong S, Lobb SB and Nijhoff FW**:**
Discrete-time Calogero–Moser system and Lagrangian 1-form structure.
*Journal of Physics. A*,
44
(2011),
365203.

**C1.**
Zhang W, Kirk V, Sneyd J and Wechselberger M**:**
Changes in the criticality of Hopf bifurcations due to certain model reduction techniques in systems with multiple timescales.
*Journal of Mathematical Neuroscience*,
1
(2011),
no.9,
22.

**C2.**
Cao X and Zhang Z**:**
Differential Harnack estimates for parabolic equations.
*arxiv.org*,
1001.5245
(2011),
1–10.

**C2.**
Kashima K and Kawai R**:**
Lévy processes - a generalization of white noise.
*ISCIE Journal 'Systems, Control and Information'*,
55
(2011),
no.12,
505–512.

**C3.**
Henderson A**:**
Enhancing the Jordan canonical form.
*Australian Mathematical Society Gazette*,
38
(2011),
no.4,
206–211.
MR2868054

**C4.**
Fish A**:**
Solvability of linear equations within weak mixing sets.
*Israel Journal of Math*,
184
(2011),
477–504.
MR2823987

**C4.**
Fish A, Nazarov F, Ryabogin D and Zvavitch A**:**
The unit ball is an attractor of the intersection body operator.
*Advances in Mathematics*,
226
(2011),
2629–2642.

**C4.**
Tillmann S**:**
Geometry & Topology Down Under.
*Gazette of the Australian Mathematical Society*,
38
(2011),
no.5,
261–263.

**C4.**
Weber NC**:**
U-Statistics.
*International Encyclopedia of Statistical Science*,
21
(2011),
1634–1635.

## Conference Proceedings

**E1.**
Britton S and Henderson J
(2011)
Teaching and Learning Proof-Writing in Linear Algebra.
*Volcanic Delta 2011: The Eighth Southern Hemisphere Conference on the Teaching and Learning of Undergraduate Mathematics and Statistics*,
*Proceedings of Volcanic Delta 2011*,
John Hannah and Mike Thomas (ed.) ,
University of Canterbury,
ISBN 978-0-473-20019-0,
22–32.

**E1.**
Easdown D
(2011)
Excursions to and from semantic oblivion.
*Volcanic Delta 2011: The Eighth Southern Hemisphere Conference on the Teaching and Learning of Undergraduate Mathematics and Statistics*,
*Proceedings of Volcanic Delta 2011*,
John Hannah and Mike Thomas (ed.) ,
University of Canterbury,
ISBN 978-0-473-20019-0,
78–85.

**E1.**
Galloway DJ
(2011)
Nonlinear Dynamos.
*IAU Symposium 271*,
*Proceedings of the International Astronomical Union - Astrophysical Dynamics: From Stars to Galaxies*,
Nicholas H Brummel, A Sacha Brun, Mark S Miesch and Yannick Ponty (ed.) ,
IAU Symposium Proceedings Series,
Cambridge University Press,
ISBN 1743-9213,
297–303.

**E1.**
Goldys B and Maslowski B
(2011)
On stochastic ergodic control in infinite dimensions.
*Seminar on Stochastic Analysis, Random Fields and Applications VI*,
*Seminar on Stochastic Analysis, Random Fields and Applications VI*,
Robert C. Dalang, Marco Dozzi and Francesco Russo (ed.) ,
Progr. Probab.,
Birkhäuser/Springer Basel AG,
ISBN 978-3-0348-0020-4 60-06,
95–107.
MR2857020

**E1.**
Marchev D
(2011)
Markov chain Monte Carlo Algorithms for the Bayesian Logistic Regression Model.
*Annual International Conference on Operations Research and Statistics*,
*Proceedings of the Annual international conference on Operations Research and Statistics*,
Prof. C. B. Gupta (ed.) ,
Global Science and Technology forum,
ISBN 978-981-08-8407-9,
154–159.

**E1.**
Ng KH, Peiris MS, Lai SY and Tiew CS
(2011)
Efficient Estimation of ACD Models Using Estimating Functions.
*Statistical Concepts and Methods for the Modern World*,
*Proceedings of the International Statistics Conference 2011: Statistical Concepts and Methods for the Modern World*,
S.Peiris, S.G.Banneheka, C.D.Tilakaratne, T.B.Swartz, S. Ganesalingam (ed.) ,
Institute of Applied Statistics, Sri Lanka,
ISBN 978-955-0056-01-9,
122–134.

**E1.**
Parkinson J and Schapira B
(2011)
A Local Limit Theorem for Random Walks on the Chambers of \(\tilde A_2\) Buildings.
*The Boundaries and the Alp Workshop 2009*,
*Random Walks, Boundaries and Spectra*,
Daniel Lenz, Florian Sobieczky and Wolfgang Woess (ed.) ,
Progress in Probability,
Springer,
ISBN 978-3-0346-0243-3,
15–53.

**E1.**
Poladian L
(2011)
AA Genotype-To-Phenotype Mapping For Microstructured Polymer Optical Fibres.
*2011 IEEE Congress of Evolutionary Computation (CEC 2011)*,
*Proceedings of the 2011 IEEE Congress of Evolutionary Computation (CEC 2011)*,
Institute of Electrical and Electronics Engineers ( IEEE ),
ISBN 9781424478330,
378–385.

**E1.**
Poladian L
(2011)
Distinct targeting of multiple mathematical proficiencies in first-year service teaching.
*The 17th Annual UniServe Science Conference*,
*Proceedings of the Australian Conference on Science and Mathematics Education 2011*,
Manjula Sharma, Alexandra Yeung, Trisha Jenkins, Elizabeth Johnson, Gerry Rayner & Jan West (ed.) ,
UniServe Science,
ISBN 978-0-9871834-0-8,
139–144.

**E1.**
Segerman H and Tillmann S
(2011)
Pseudo-developing maps for ideal triangulations I: essential edges and generalised hyperbolic gluing equations.
*Topology and Geometry in Dimension Three: Triangulations, Invariants, and Geometric Structures*,
*Topology and geometry in dimension three*,
Weiping Li, Loretta Bartolini, Jesse Johnson, Feng Luo, Robert Myers and J. Hyam Rubinstein (ed.) ,
Contemporary Mathematics,
Amer. Math. Soc.,
ISBN 978-0-8218-5295-8,
85–102.
MR2866925

**E2.**
Fung T and Seneta E
(2011)
Rate of decay of the tail dependence coefficient and modelling for bivariate financial returns distributions.
*The 58th World Statistics Congress*,
*Proceedings of the 58th World Statistics Congress (ISI2011)*,
ISI

**E2.**
Kim PS
(2011)
Modeling Leukemia stem cell differentiation: Bridging agent-based and partial differential equation models.
*Advanced computer and information technologies*,
*Advanced computer and information technologies, Proceedings of the Russia-Korea Workshop*,
ISBN 978-5-321-02039-5,
28–51.

**E4.**
Peet MM, Kim PS and Lee PP
(2011)
Biological Circuit Models of Immune Regulatory Response: A Decentralized Control System.
*50th IEEE Conference on Decision and Control and European Control Conference (CDC-ECC)*,
*50th IEEE Conference on Decision and Control and European Control Conference (CDC-ECC)*,
IEEE (ed.) ,
IEEE,
ISBN ISBN 978-1-61284-800-6 / ISSN 0743-1546,
6.